mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGCACTGCCTCTTCCCTGGCT TGGGGACAGGCAGAGCATG GCCAGAGAGAAAGAGAAGAGATGACAAAGACTGGGGACAGGCAGAGCATGAATGGAACTATCAATAGACACATTTGTTCACTGAGTTACAAAGGGAAACACACACATATACATACATAGATAAAGGCATGATACATCCATCATCTCATCTATTGTGGCTACGCTCATGCACTGCCTCTTCCCTGGCTCTCTCGTTCTTTTTCCTTCTTTATTTAT ATAATCTAAAAAACCAGATAAGAGATAATAGCCAGAGAGAAAGAGAAGAGATGACAAAGACTGGGGACAGGCAGAGCATGAATGGAACTATCAATAGACACATTTGTTCACTGAGTTACAAAGGGAAACACACACATATACATACATAGATAAAGGCATGATACATCCATCATCTCATCTATTGTGGCTACGCTCATGCACTGCCTCTTCCCTGGCTCTCTCGTTCTTTTTCCTTCTTTATTTATCTTTTTCTTGTGGAATAATTACTGCAATAATCTACTTCATTTTATAATTTTTATCTTTTCAACTGCTCTATTCAATTACCTTTGACTGCTCTATTATTCAATCACCTAATTCTTTTGTCAATTCAATATTTCCAAGCTGTTATGTCAGGTGGCTTATACAATTTATAAATTTTTTTTCATTTGCAATTTATAAATTACTTCTCCAAGCTAATATACTGTATAGTTTATAAAAAAATATTACCGTCAATATTTTATAAAAAAATTTATATCCCAATAATTTTCTACATAATAGAATAAATATCTTCAGCGTTTTAATTTTAGCTGTGCAGATGGAAGAAAAGAAAAGGCAAATGGAAAAAGAGTGCACTGTTTACGCGGGA 3 1 3' arm Arachis_duranensis mirnest MIR408 0.00000000000006 ahy-MIR408 2e-22 -51.417 .....((((((.((((((.(((((...((((((((((.((((((.((((((.((...(((.(((((((.((....))....((((........(((.......................................))).....))))))))))))))...)).)))))).))))))..))))))).))).))))).)))))).))))))...... (-51.417)