mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTATCCTCATCATCATCTTCT GAGCATGATGAGAAAGGGTTGTT TTCAATATATGCTATCCTCATCATCATCTTCTTCCTCTATTTCTAAAGATCCTCCAATTTCTTCACCCACTTCTTTCAAAATCCCTAATTCGATTCAATTTTGGAATCACTGAATCAGCCTTGATTATTATCTGATCTTGATCATGGGAGGTGGAAAGGAGCATGATGAGAAAGGGTTGTTTTCACACC AAATCAAATTCATTCAATATATGCTATCCTCATCATCATCTTCTTCCTCTATTTCTAAAGATCCTCCAATTTCTTCACCCACTTCTTTCAAAATCCCTAATTCGATTCAATTTTGGAATCACTGAATCAGCCTTGATTATTATCTGATCTTGATCATGGGAGGTGGAAAGGAGCATGATGAGAAAGGGTTGTTTTCACACCTTGCTCAAGGGGCAGCATCAAGTTATGCTCACTCACATGGACATCATGGAGGATACCCTCCTCAAGGGTACCCTCCCCCTGCTGGATATGGTGCCTACCCTCCAAGACAACACGGTTACCCTCCCGCCCACGGGTACCCCCCTGCCGGTTACCCTCCTCCCGGTGGCTATCCTCCTCCTGGTGGTTATCCACCAGCTGGTTATCCTAATCCACATGGGCATAGTCACCACAGCGGCAGCGGGATGGGAGGATTGCTTGCTGGAGGTGCTGCCGCTGCGGCTGCCGCATATGGCGCCCACCATCTTTCTCACGGCCACCATAGCGGACACATGGGCTACATGGGCCACATGGGACATATGGGACACATGGGACATGGGAAATTCAAGCATGGCAAGTTCAAGCATGGAAAGTTCGGCAAGCATGGGAAATATAAGCGTGGCA 3 2 5' arm Arachis_duranensis mirnest 100 osa-MIR164a 0.0006 -33.9 ..........((.(((((..(((((((((((((..(((((((((...((((.(((((.....((...........................)).......)))))((((...(((((....)))))......))))...))))...))))))))))))))).)))))))...))))).))......... (-33.9)