mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ATACTCCCTCCGTCCCATAAT TGTGGGACCAAGGGAGTATAT AAACTAAATAAATACTCCCTCCGTCCCATAATATAAGACATTTTTGCAAGCTATTTGCAAAAACATCTTTGTGGGACCAAGGGAGTATATGCTGACAT GTTCAAATCAGGTATTACTGGAAATATCACCGGTGCATAGAAATCGAGGGAATGCACAGATTAGGTTGCACATGACGTATACCACATATAAATGGGTACTCAAAACTAAATAAATACTCCCTCCGTCCCATAATATAAGACATTTTTGCAAGCTATTTGCAAAAACATCTTTGTGGGACCAAGGGAGTATATGCTGACATCAAAGACCAAATGTAGTATCTTCTTGCTGACACTTGAGGCGCCATAGTGCAGATGCATGAATGAAAAGCAGCTCTGATAATCCACTTCTGAACTCAGGCTAATATGCACCCGCGTGGACGAAAAAGATCAAAACAAATACTAGAAAAATTAAAAACAAAATCATTTCTTCATGACCTGATTTGTCTTTTTTTTGAACCATTTGTGAATTTTTTTCTGGCCGGGTGCAGATGAGCCTGGCCACCGAAACGCTACACTCCAACATAGAATCTCTTGATGCATCAGCAGTTCAAAGCATTCTGAGTATGCAAGTATAAAATGGCTCAACATCCGGTTCGTATGAGCATATCTCATAAATCACTTACAGAGAATAACAGAGAAGCAAATAATCAAATAGCACAAGATGACCAGAAATACCTCGTGCCG 3 0 5' arm Hordeum_vulgare mirnest MIR1122 0.0000000000004 tae-MIR1120 0.00000002 -33.9 ...........(((((((((..(((((((((....(((..(((((((((.....)))))))))..))))))))))))..))))))))).......... (-33.9)