mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ACATTTTGGGACGGAGGGAGT TCCCTCCGTCCTAAAATGTAA CAGGAAAATACTACTCCCTCCGTCCTAAAATGTAAGACGTTTTTTACATTTTGGGACGGAGGGAGTAAGTAGTTACT CGCCCCGTGTGGATTATCTCTGCAACAAATTATTCATTGGAAAGCAAAAATAGCTAGTAAAGAAGCCGGACGGTACTTTGGAAAGAGAAATACCCACTGCTACATAAATAAAAATGGCAAAAGATAGGAACACTGCTATAAGGTCTCAACTAATGGCCAGGAAAATACTACTCCCTCCGTCCTAAAATGTAAGACGTTTTTTACATTTTGGGACGGAGGGAGTAAGTAGTTACTTCACATGTCTTCATCGCTTCTTCTTTCTATGCCCTCC 0 0 3' arm Hordeum_vulgare mirnest MIR1122 0.00000002 tae-MIR1122 0.0002 -41.2 ...((...(((((((((((((((((((((((((((((....))))))))))))))))))))))))).)))).))... (-41.2)