mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTTGGGACGGAGGGAGTACTG ACTCCCTCCATCAAAGAG AATGTACTACTCCCTCCATCAAAGAGCTTGAGACAATTATTTTGGGACGGAGGGAGTACTGTATAT TTTTTTTTTTTTTTTTTTTTTGTATGCAGAACGATTTGCAACGTGAACTTTCTTCTCACACTTGAGAGCCCATCTTAAAAATACATGTATCATTGTCTCTCACTGGTTCCAATCTAATTTGGAGTCTTGAGATCATTTCTTTCACCATGACTGTTTTTTGTTTCATGTATATGCATATTACAGCCACTGTGACAGGCTCAAGTAAATGTAGATCCGTGACAGAGCACAGTCCAATCTTTGTCGAAACCAATATATTTCTGAAGTTCCAAATGATGAACTTTTCACAGATGATTTAATGTACTACTCCCTCCATCAAAGAGCTTGAGACAATTATTTTGGGACGGAGGGAGTACTGTATATGGTACTCCTATGAAAGAATTCAACAAATGGATTTGTGCTAACTTGTTCCTTTTGCTTGTCAGAGTTTTTTTTTTTCGAATATGCTTGTCAGAGAATACAAGTGCTGAATGACTTTAAACTGCGAATCTATGATTTCTTCAAGCAGGATATTAGCGAGTCGCAATATGGTTTCAGCCATAGGTCTCCATCGACATAAGACGTGTTCAAGTAAGGGCAATGCTTGCACATCGCTTGAGCCTCCNAGAAGCGTTACGGGGGCTCCTGCCCGCCAAGGTTTGCANCAACCAACCAAGTTACACTTTGGTACC 4 1 3' arm Hordeum_vulgare mirnest MIR1122 0.0000000002 osa-MIR1862e 0.00001 -22.7 .((((((((((((((((.((.((((..(((...)))...))))..)).))))))))))..)))))) (-22.7)