mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCTTTCCTACTCCTCCCATTCC AATGGGAAGATAGGAAAGAAC AAGTTCTTCGGAATGGGAAGATAGGAAAGAACCAAGGTGTTGTCAGAAACATCTTTGTTTTCTTTCCTTCTTTCCTACTCCTCCCATTCCATTGGTTT GGGGGGGGAGTAGGTGAGAAAGATGGAGGAGTATGGGCGAAGGGGAAAGTGAGTTGTGCAAGTTCTTCGGAATGGGAAGATAGGAAAGAACCAAGGTGTTGTCAGAAACATCTTTGTTTTCTTTCCTTCTTTCCTACTCCTCCCATTCCATTGGTTTCCTGCTATTCCTCCCTTTCGCTAGCTTTTCTTGCTTCGATCGATTATTCTAGCTGTTTTCTGCATCATCGGGCGGTTTATTCGAGTCTTTCTGTGAATCCAGATCGGCTGCACACAATAATAAGTCTTTACTATTTTTCATCCTTTAGTTTGTTTGCAGTTTCTTTTGTTGTTCTGTGTGAGTGAATTATAAATATGTATGCGGGGAGAGAGGGTGAAGAGGGAAGGGGAGAGAGAAGTGCAAGAAGTTTTGGGTTTGGGAAGCTAGGAAAGAAGGATTTCTTTTGAGGAAGTTCTTTCCTAGACCACCCATTCCACTGATTTCCTGCCATTCCTCCTTTTCCCTACCTTTTCCTGCTTTGATATTTCATCTGCTCCAATGGTTTGATAAGATTATCTTGTTCCTCTTTATAAATTTCCTTCATTATTTTCTCTGTTTTCACTATTTTGGCTTTTGCAGGTTTTGGGATCATTTATTCCAACTGGGAAGTGAGAATAAATTTTGGGGGAATTAAAAATCATTAGATTGGAAGGTTAGCTTTCAGTTGAATAAAATATTGGTAAAATATAATTTTTTATAATTATTTTTATTTTTAAATTTAAAAAAATTAGAATTATTTATTATATTGATAGTTCGGGAAAAATTGTAATCTCAAATGATG 1 1 3' arm Juglans_hindsii_x_Juglans_regia mirnest 100 vvi-MIR482 0.00002 -33.9 .........(((((((((.(((((((((((((.((((((((......)))))))).))..........))))))))).)).)))))))))........ (-33.9)