mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ACTTCCCAATTCCGCCCATTC GTCGCAGGGTTTGGAAGGAA AGTTAGCCAAGGAGTCGCAGGGTTTGGAAGGAACATTAGCGGTTTATTCAAGCATGCCATCATGGTCGGGAAACGTGTTCGAACTGAACCAAAATCGCCGAAGGAGCAGTTTCCGTCAGCTCAGCCGCCGTGGAGTTAGCCCTAATGAAACTTCCCAATTCCGCCCATTCCACCGCTAGA CTCCCGCATCATCTCCGCCACTTCTCATTATCAAATTGGGGTTTCGTGTAAACCTCGAAGAACCCTAATTCAAAGAGGAATTGTTAGGTGCGAATCACATTCTACTGCTTCTTCAGATGTTGTCGTTGAGAAATCATCTGGAAATGCTTCGAGTATCTCTGCTCTTGAACAGCTCAAAACCTCTGCAGCTGACAGGTATACAAAAGAAAAGAGTAGCATTATAGTTATTGGGCTTAGTATCCATACTTGTCCTGTAGAAATGAGGGAAAAACTTGCAATTCCTGAAGCAGAGTGGCCAAGAGCAATCAAAGAGCTATGTGCTTTGAACCACATAGAAGAAGCTGCTGTTCTGTCTACATGTAATCGCATGGAGATTTATGTTGTAGCTTTGTCTCAGCATCGAGGAGTAAAAGAAGTGACTGAATGGATGTCAAAGACTGGTGGAATCCCGGTTTCTGAGATTTCCGATCACCGTTTTCTGCTATACAACAGCGACGCAACCCGCCACATCTTCCAAGTGTCCGCCGGACTCGAATCATTGGTGCTCGGAGAGGGCCAAATCCTCGCTCAGGTGAAACAAGTCGCTAAAGTTAGCCAAGGAGTCGCAGGGTTTGGAAGGAACATTAGCGGTTTATTCAAGCATGCCATCATGGTCGGGAAACGTGTTCGAACTGAACCAAAATCGCCGAAGGAGCAGTTTCCGTCAGCTCAGCCGCCGTGGAGTTAGCCCTAATGAAACTTCCCAATTCCGCCCATTCCACCGCTAGAGTTTTACTCATCGGAGCTGGAAAAATGGGAAAACTAGTCATCAAACATTTGATGTCAAAAGGATGCACGAAAATAGTAGTTGTGAAATCGTCCGTCGAACGAGTCGACTTGCTCCGAGACGAGTTCAAAGACATCGAAATCGTTTACAAACCGCTCGACGAAATGATG 4 1 3' arm Lactuca_sativa mirnest 100 pvu-MIR482 0.0001 -44.8 ..(((((...(((((.((.(((((.(((((...((((((.((((..((((.((..((.....(((.((((((..((.((((...(((.......))).))))...))..))))))))).....)).))..))))...))))))))))...))))).))))).))..)))))...))))). (-44.8)