mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGCATCATCAAGATTCACGT GAGAATCTTGATGATGCTGCA CCTAAAGTCGTTGTTTTCCGGCGTGGCATCATCAAGATTCACGTACAAAAGCAAAAAGCAAAAGCTTTTTGAGGATGAGAATCTTGATGATGCTGCATCGGCAATAAATGGCTGTGC TACTCCTCATCTCTATCCTCTCCTTGAAGATCTAATTCATGTTTTTTTCCTACCAAACTCAGATCTCCCTCCGGCCGGTTGATTTCAGACTTTTATCTGTTTTCCGGTATCCGAAATATCTAACGTTTACATATCTGCTTATGCAGTTGATTATATTGTTTTGATGGTCTCTTACTTAGGTTTCTGATTTTGGTTTCGATCAAATCTACTCTCTCTTTTCGTATTCGTAGATGTAACCGCCTAAGTCTTCTGGATCATCCGTCTTAATTTCTTTTTCTGAACATCAGATCATCGGTTTGTTAGGTCAGAATCTGAACACATGATCATGTGGATCATGTCCCTGCGTTGCCTCGGAAATGAAAAATCCGATCAAAACCGCGCATTGGATTCCGACCAATAACAAAGCGTATGCGAGATCGGAGAAGAAAAATAGGGTTTTGTTCTTTTTATATTTTTATATTTTTTTTGTTTGAAAAGGAGTTGCTATTGGAGTAGATCTTTTGGTTTTATGTGGTACCTCTCCTTAGTGACTTTAGAATTCGACCAATCTTGACGTGCCACATCACATCTTCGCTCGTGGCCTTAATTATTAAGAGTGACCCCATGAAGACCCCCTCCGAAGTTTGATTTTTCAGCCATTTTTTCATCTGAAAGCTCTCTAATGAAAAAAAAGACATACTCTTATTCTTCTTCTTCTTCAAGGGTTACTATCAGCCGCCAAGGGATTTTTCCGATCAAACCCTAAAGTCGTTGTTTTCCGGCGTGGCATCATCAAGATTCACGTACAAAAGCAAAAAGCAAAAGCTTTTTGAGGATGAGAATCTTGATGATGCTGCATCGGCAATAAATGGCTGTGCTATAGGTAGATGGCGTCAAGAAGTGTACTCTCTGCATTGTAGATGGTATCGGTAGCTGAC 1 0 5' arm Lactuca_sativa mirnest mir-172 4.0E-13 vvi-MIR172a 4.0E-13 -48.4 .....(((((((..((.((((.((((((((((((((((((.(((.......((((((((....))))))))...))).)))))))))))))))))).)))).))..))))))).... (-48.4)