mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGCTTATTCAAGAAGGCCAGA CAGTAGTTCTTTGAAAAGTTAT AAGTCCAGTATCCAGTAGTTCTTTGAAAAGTTATTCAGTGAAAACATCACTCGATTTTCCATCATCAGTTCTCAGAATCGATGAGAGCCCATCACCTGCTTCTCTTGATTCTGTTGTGGTCCCAGGAATAGGTACCACAGAATGTGAAAAATACAGTACCAGCCCTATCAATTCACACGATTGGTTTGGAGACTGATCAGCTTATTCAAGAAGGCCAGATAGTGGACC GGGGGAGAAAATGCAGTAGAAATGAATAGTGACAATCACGACGGCAGCCCCTACAATCACCATTCGCAACCTCATCAGCAGCGCCGCCCACGAGGCTTCGCTGCGGCAGCGATGGGCATCTCCACCATTACCACAACGATCAACACCAGTCCTAGGGGCGGTAGAAATGAGAGAGAGAAAGAGAAAGAACGAACCAAGCTTCGAGAACGCCACCGCCGTGCCATCACTAGTCGTATGCTAGCCGGTCTCCGACAATACGGCAACTTCCCTCTACCGGCACGCGCAGACATGAACGACGTACTCGCCGCCCTTGCCCGCGAAGCTGGGTGGACCGTCGAGGCCGATGGCACTACATTTCGCCAATCTACACCGTCTTCTAAATTGGGTTTGTATCCAGGAAGGTCAGTAGAAAGTCCAGTATCCAGTAGTTCTTTGAAAAGTTATTCAGTGAAAACATCACTCGATTTTCCATCATCAGTTCTCAGAATCGATGAGAGCCCATCACCTGCTTCTCTTGATTCTGTTGTGGTCCCAGGAATAGGTACCACAGAATGTGAAAAATACAGTACCAGCCCTATCAATTCACACGATTGGTTTGGAGACTGATCAGCTTATTCAAGAAGGCCAGATAGTGGACCAAGGGTTAAACTTTTTAGGCACTGCATATGTTCTGTTTATATGTGATGCCTGGGACGTGGGTTGATTAACAAATTCTGCCAGTTGATTGATCGGGAAACTG 5 1 3' arm Lactuca_serriola mirnest 100 100 -56.7 ..(((((.((((..((..(((((.((.(((((....(((((.....))))).(((.....))).((((((..(((((((((.((((((.........)).)))))))))))))(((((((.((.......)).)))))))..((((.....))))...((((.((.(((.........))).)).)))).))))))..))))).)).))))).))..)))).))))). (-56.7)