mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAGATACATCCGTATCTAGA TAGATATAAATGTATTTAGA TTTTGAGCAAATCAGTACTACCTCCGACCCATATTAGTTGACCCCCATTTGTCTAGATATAAATGTATTTAGACATGTTTTAGTGTTAGATACATCCGTATCTAGATAAATGAGGGCCAATTAATTTGGGTCGGAGGAAGTAGCCTGTTTTGGATT CGATTTTTNNNTTTTTTTTTTGAGCAAATCAGTACTACCTCCGACCCATATTAGTTGACCCCCATTTGTCTAGATATAAATGTATTTAGACATGTTTTAGTGTTAGATACATCCGTATCTAGATAAATGAGGGCCAATTAATTTGGGTCGGAGGAAGTAGCCTGTTTTGGATTATTTTTTTCCTTCACTTTTTGAAAAAAAAGCAGCCAAGTAGATAAAAGCACGCAGCAAAGCGCAACCTGGTGGTAAATTGGCAATCCAACGCTCACAAAGAAATCAGCAAGAGAAACAAAATAATCGACGGCCAGATGCGGTCCACCGGGCGAGCAACTCCCGGCGTCGGTGACATGGCTGGCCGGACACGTCTCTCCGCGCACCACCACACTCTTGGTTCGCAGGTGACACCGGCGACCTGCGCGCCGTACACAGCAGCAGCAGTGCGCCGCTGCCCCACGCGCTGCAACTTGCCGGCGGGGCGCGGCCACGACACAAGGCATCCCATGCGCAGGTGTCTGCTGTACTGTACCACGCAGCTCCACCGACGCGCCATGGCCTGGTCCGGCCGAGAAGGAACTAACGTGCGCTAGACATGCTGGTGGTCGGCGAGGCAGACGGCGGCGCGGCAGAAGGGGCAGCGGGAGGCGGCCTGGACCCAGGGCACGGCGCAGGCCCAGTGGAAGCGGTGCGCGCAGGGGAGGTGCGCCAGCACGTCCCCCGCCCGGAACTCCTCCAGGCACACCGCGCACTCCGCCTGCTTCTGCTGCTGCTCC 2 0 3' arm Leymus_cinereus_x_Leymus_triticoides mirnest MIR1122 0.0000000000006 tae-MIR1122 0.000000002 -67.3 .......((((.(((((((.(((((((((((.((((((((.(((.(((((((((((((((..(((((((((.((((......)))))))))))))..))))))))))))))).))).)))))))).))))))))))).))))..))).)))).... (-67.3)