mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TACTCCCTCCGTCCCAAATTA ATTCGGGACGGATGGAGTACA TACATTTTTCTCGTGTTATCTACTCCCTCCGTCCCAAATTACTTGTCGCAGAAATAGACATCTATTGCGACAAGTAATTCGGGACGGATGGAGTACAATGCTGTTTTCACTTCA CGATTTTTTTTTTTTTTTTTTGATTCAATAGATTGGCGTTTCTTAAAATGGAGTTATTCGATCTCAGCTCCGTTTATACATTTTTCTCGTGTTATCTACTCCCTCCGTCCCAAATTACTTGTCGCAGAAATAGACATCTATTGCGACAAGTAATTCGGGACGGATGGAGTACAATGCTGTTTTCACTTCAATGTCATCGAATTTACACAAAGCTGAAGATGTTGCAGAATCGGCCTCCAAATCAAGCTTGTAGATAGTATTCAGAAACTAAATTACATAGTGTAAATTACGAGAGCATACTGAATTGTAGATGAAGAGCCTGTTCGGAGCCACTCCACTCCGTCAAATCCTCGGCTCCACTCCCCGCTCCAAGATTGCTGGCTCCCAATGACAAATCAGGAGCAGACAAAGTTGTTCGGCAACAAACTCCACTGAAGAGAAATTAAGCTGGCTTCTGAACGAACAGATCTTCGATCTGCTTCAGGTTCAGGCGTCTTGGAACTCCAGCACCACCACGGCCTTCGCCTTCCTCCCGCTCTCGCTGCGGAGCAGCCGCCGCACCGCGGCGATGAGCCGCTCGGCCGCTGCCGGCGATGACCGGCAGAAGGCGGCGTGCCTGGCGATCGCCGCCTCTACCTCCGCCGTGGTCGATCCTCCTCCACTGACGCCTGCGGCGGCAAGCTCCTCGCCCACGGCGTCGGCGCATAGGCCGCACAGCCACCGCCCG 2 0 5' arm Leymus_cinereus_x_Leymus_triticoides mirnest MIR1122 0.0000004 tae-MIR1135 0.00000002 -46.6 ............(((((...((((((.((((((((.((((((((((((((...((((....)))))))))))))))))).)))))))).)))))).)))))............. (-46.6)