mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ACATGGCTGATTGTCAAGTTC GCGTTGATTCGTGGCCATCTTG TACGGCTTCAGGCGTTGATTCGTGGCCATCTTGTAAGGAGGCAAGCTGTTTCGACACTTCGTGCAACATGGCTGATTGTCAAGTTCCAAGCTATC GTGAGGTGAATCTGGAATTGGAGAAGCAGAGCACTGGTGGGTCTGATGTGCTGTCCAATGACCTGGAGAGGGTGAAGGAAGAGCAGGCGGCCGTCAAGGCACAAGCTGCCTTCAGAGGGTACCTGGCACGTCGGGCGTTCCGTGCATTGAAAGGAATCATACGGCTTCAGGCGTTGATTCGTGGCCATCTTGTAAGGAGGCAAGCTGTTTCGACACTTCGTGCAACATGGCTGATTGTCAAGTTCCAAGCTATCGTTCGTGGTAGAAATGTCAGACTTTCTAGCGATGCAGTGCAATTCAGTTGGAAGCTTGCCGAGCAGAAATCTCTGGGTGCTCAACCAGATGCATGGAAGGAGAGATTGGCTTCAAATGCGTTTGCTCGTAAGCTTCTAGCTTCACCGATTCTGGTAGAGGCTTTCACTTCCAGTATGATGAGAGGGATCCAAATTCAGCCTTCAACTGGTTAGAGAGATGGACCATGAGTCGCATCTG 5 1 3' arm Lolium_perenne mirnest 100 100 -27.5 ...(((((..(((.(((((...(((((((.(((((.((((................)))).))))).)))))))...))))))))..)))))... (-27.5)