mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TACTACTGGTGGTGGTGGCGC GCCGCCACCGCCGGCGAGCAA ACAACAACAACTACTACTGGTGGTGGTGGCGCATCTCCTCAAGACTTTCGGCAAAGTATAGCAGCGCCGCCACCGCCGGCGAGCAAGACGGCGA ACACACTCTATATACGAAGTCCATTACCCACATTTCCCCCTCACAACTTGCTTGCACTTACATGGCTTCTCCACACATCACAATAGCGATCTTCTTCATGGTTCTGTTACCATCATCATCGTGGCTTTCACAGGCTAGGACGATGCCGAGCGGCCATGCACAAGAACATGGCGGGAAGAGTAGTTTTCTTGCCACAACAACAACTACTACTGGTGGTGGTGGCGCATCTCCTCAAGACTTTCGGCAAAGTATAGCAGCGCCGCCACCGCCGGCGAGCAAGACGGCGACCAAGATCGTCAAACGTTCGTGGACGGCCGGCTGGTCGACGACGCAGGGATCTGTGCCCAGCCCCGGCATCGGCCATCATGCATAGATGCGAATGCCACACGTATATATATACTTGTATATGTCAACAATAGATACGCAAGTGAAGCTAGCTAGGTTATACGTACATAGCACCATACCTGATTGATTATGTTAGCAGTAAGCTAGGTTATATCATGGTGCAGAGATATGTTCTTTCTGGTCGATCATAGACCCCGACATATATTTATGTCGTACTTTTAATAAAGAATTTAATGGTGGAAAAAACCAAGGTG 5 0 5' arm Lolium_perenne mirnest 100 100 -34.3 ................((((((((((((((((..((.......(((((....)))))..))..))))))))))))))))...((......)).. (-34.3)