mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGATTTTGGAGGGATGAGAGA TTTATTCCTTAGAAATTACA ATTTCAGTGAGAGATTTTGGAGGGATGAGAGAGAAAGAGAGAGAGATTGGAGCGAAGTAGGATCAAATTAGCAGAGCGAAATGATGAGAAAGTGTGTGTAGATTAGAGAGACGGTGGAAACTAGTGTTTCGTCGACATTGGGGATGAGAGTGAGAACACCACCAACTCCTCTCTCTCTCTCTCTCTTTATTCCTTAGAAATTACAACAAACCC GACAGAACCAACCATCAGAGCATTTGTTCTTGGAAGGGAGAGCGGTGTCGCGGCGATCGAGCTGCTGCTGCGACTTGCCGGTAGAAGTCGACGGCACAGACACTCTCTCTCTGTCCTTGATGTTCCTTGAAATGGACGGCGACGATTTCTCCAAGTGCTTATCCAACGCGTCGTTGATCCGCTTCCGATCCAACGGCCCTCTGCCGATCTCCGCCTTCGAGGACCCACCTCCGCCTCCTCGATCCCTATACATATCCTCCGTGTATACGTATATCTATATATATCTTCAAATTCGAGAATTACAACTTTGGTTGATATTCATCGAAAACCCAATTTTAGTGTTAGAAAACGCAATTTCAGTGAGAGATTTTGGAGGGATGAGAGAGAAAGAGAGAGAGATTGGAGCGAAGTAGGATCAAATTAGCAGAGCGAAATGATGAGAAAGTGTGTGTAGATTAGAGAGACGGTGGAAACTAGTGTTTCGTCGACATTGGGGATGAGAGTGAGAACACCACCAACTCCTCTCTCTCTCTCTCTCTTTATTCCTTAGAAATTACAACAAACCCCCCAGTGTTTAACCTTGGTAACAAATTAGTAAGTCTTACGTTTTTAATTNTAATAAATTAAATCCTAAATTTTTTAACTCACAATACGAATC 4 1 5' arm Actinidia_deliciosa mirnest 100 100 -56.9 ............((((((..(((((..(((((((.(((((((((((..((((....((....((.((((.(((..(((..............))).))).)))).))...))(((((...((((((((.....))))))))........((....)).)))))..))))))))))))))).)))))))..))))).))))))........... (-56.9)