mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCATCTTCATCATCATCTTCA ATATGATGGGTAAGATGTCA CCGCCTCGTCATCATCTTCATCATCATCTTCAGCAGCAACAGTTGCGCCAAATATTTCACCTGACATGTTTAAGATGGCGACTGATATGATGGGTAAGATGTCAACTGAAGA GAAAAGCGGTCCCAGTTTCAGTCCTGGATCGATTCCATCCGACGTATCACCTGACATGCTCAAGACTGCAACTGACATGATGGGTAAAATGTCGTCAGAAGACCTTCAAAAGATGTTTGAAATGTCTTCCTCTTTGAAGGGTAATGGGGCCGCCTCGTCATCATCTTCATCATCATCTTCAGCAGCAACAGTTGCGCCAAATATTTCACCTGACATGTTTAAGATGGCGACTGATATGATGGGTAAGATGTCAACTGAAGAACGTCAAAAGATGTTCGAAATGGCGTCTTCCTTGAGAGGAGGACAGGAAAGAGCACCACCATCAACTGCAACTTCTTATTCCAACGGATTAAGACCGGACGACCTTATTAGAACTCGAGAAAATTTGGAAGTGAATGGCAGCAATGTCGGTGAAAGTAGTTCCTCTCAGAGTGTGAATACAGGAATTTCTGCTCAGACAAGCTTCCTAAATCCCGGTGCTGATTTACAAGAACAAATGAGAAACCAAATGAAAGATCCAGCTATGCGACAGATGTTCACAACCATGATGAAAAATATAAGCCCCGAAACAATGGCTAACATGGGCGAGCAATTTGGGTTCAAGCTTTCTCGAGAAGATGCAGAGAAAGCTCAACAGGCTATGTCTTCACTGTCGCCCGAAGCTTTGGACTCAATGATGAAATGGGCGGATAGGGCTCAACGAGGTGTAGAAGGT 4 1 5' arm Mimulus_guttatus mirnest mir-598 0.000006 100 -25.3 .....((.(((.((((((..(((((((..((((((((....))))((((((((((.((....)).))))).....))))).)))).)))))))..)))))).....))).)) (-25.3)