mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGAAGGGGCATGCAGAGGAG CCTGTGCCTGCCCTCCCACC AGAAAGGGCGCCGAGGAGGTAGCAGTAGCAGTGGAAGGGGCATGCAGAGGAGAGGAGAGGAGAGGAGGGAAGGCGAAAGAAATCCTGTCTCCTGTGCCTGCCCTCCCACCCCTGCTGTTACGACTCGCTTCTGCCGGT GACAGGAGGGGGAGACAGAAAGAAGGAAAGAAAGAAAGGGCGCCGAGGAGGTAGCAGTAGCAGTGGAAGGGGCATGCAGAGGAGAGGAGAGGAGAGGAGGGAAGGCGAAAGAAATCCTGTCTCCTGTGCCTGCCCTCCCACCCCTGCTGTTACGACTCGCTTCTGCCGGTCACGGCAATTCCTCTTCGACATCTCATCAACGAACGCTTATAGCGAAGGTAAGGGGAAGGGGGGAAAGAGGTCGATTGCCATCTTCGAATCGTTCCTGGATCTGAATCTGGGATGTTGGCCTATCGAACAGGTAGCAATCTTTTGTACACGGACATAAGTGAATTTGGGTTTCTTAGCAGGAATTGCGTGTTGGATTCTTCTTCTTCTTCTTTCTTCTTCTTCTTCTTCTGAAATGAAGACCTCGATTGCCATCTTTTTACCGTCCCAGCGGTTAATGATTTGTGTGGACAACCAAAACGGTGGGAGTCAGCTGCACGTTTGCTGTTCCCGGAGAAGCATATTTGGTAATCTTAATTGATCTGTGTGTGTGTGTGTGTGTGTTGTGAGCATTATTATGTTGCAACTTTTTGCTTATTGATCGGTGTGTCTCTCTCCACCAACGCCAACCAGTCTTTGCAACTTGGTCGAGAAATATTACATCTAATGGAGATGTGCACTTTTTGT 3 1 5' arm Musa_ABB_Group mirnest 100 100 -52 ......((((.((((...((((((((((..((((..((((((.(((.((((((....((((.....................)))).)))))).))).)))))).))))..))))))))))..))))....))))... (-52)