mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ACATCATCATCATCCTCTTCT ATGAGGATGAGGATGATGAGG CTAGTAAATCCACATCATCATCATCCTCTTCTTCGCTTTTCTCTGTTCTTCCTCCGCCCAAAACCACTCCTTTGTCTTCGTCAGATCCTAAACCTAAAAAAAGGGTTGTTCAGTTCAAGCCTCCTGCCAACCCTTTTTCTGTCAAGTCCAATAATAGCGTAGATGAAGATGAGGATGAGGATGATGAGGGTGAGAAG GGAATCACCAATCAGCTAATCAAATCCACCGGAGTCCGGTGAAGATATCCTACGAGCACTGTTTGATCCTTCAAATCTCCGATTATAAGCTTCTTCTATATTAACCCTAACCCTAGTAATCTGCCCCCTTTTTGGGATGGAATCTTTATTTGCAAACTATGCTTCTTCTGATGAAGATGATGAACAACAGTCTCAGCAAGATAAGCATCCACAACAAGTACATAGCTCGAATTCTTCAAACCCTAGCTTATTTTCCTCTTCTCTTCCTCCCCCTAAATCTTCTTTTTCACTTCCCCCACCAAAATCCCAATTAAATACTTCACTCAACTTAACCACTCCCTCATCTGTAAAGCAACATTTTGAAGAAGAAGATGAAATTCCTGATAAACCCTCATCGTTTTCCTCATCTCTTCCTCAACCTAGTAAATCCACATCATCATCATCCTCTTCTTCGCTTTTCTCTGTTCTTCCTCCGCCCAAAACCACTCCTTTGTCTTCGTCAGATCCTAAACCTAAAAAAAGGGTTGTTCAGTTCAAGCCTCCTGCCAACCCTTTTTCTGTCAAGTCCAATAATAGCGTAGATGAAGATGAGGATGAGGATGATGAGGGTGAGAAGGAGAAGCAGAGAAAAAGGTCTGAATCTTTTACTCAAACACCTTCAGTTAAGTCATTTTTATCGAGCATTCCTGCTCCAAAGAACTCGACCTCCTTGGGTGTTTTAGGTTCAGGTTCTGGAA 3 0 5' arm Nicotiana_benthamiana mirnest mir-598 0.0007 100 -45.7 .......((((.(((((((.((((((((.((((((....(((.((((.((.....................(((.(((...((((.............((((((((((..(((..........))).))))))))))))))..)))..))).)).)))).))))))))).)))))))).))))))).))))...... (-45.7)