mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CCGACGATGACGACGTCGCAC TCGTTGTCGTCGTCGTCGTCG CGCAGCCGGACCCGACGATGACGACGTCGCACTCGACCCTGCACACGTCCCGCGGGGAGTCATCGGCCACCGTGAGGCCCTTCTCGGCGAGGTAGGCCGCGAGGGACGCGTCGTTGTGGTGGATGGTCTCCACCACGCCGTCGTCGAGTGGCCGCTTCGTCGACTTTGGCTGCTCCTCTTCCTTGGAGTCGTCGTTGTCGTCGTCGTCGTCGTCGTCTGT GCCCCCGCCGCAGCCGGACCCGACGATGACGACGTCGCACTCGACCCTGCACACGTCCCGCGGGGAGTCATCGGCCACCGTGAGGCCCTTCTCGGCGAGGTAGGCCGCGAGGGACGCGTCGTTGTGGTGGATGGTCTCCACCACGCCGTCGTCGAGTGGCCGCTTCGTCGACTTTGGCTGCTCCTCTTCCTTGGAGTCGTCGTTGTCGTCGTCGTCGTCGTCGTCTGTGGGCGGGCTGTACCCGATTGCTCGCCAGTGCGGATTCTCCGAGTTCTCGTCGGTCTGCCATGAGTAGAAGACGTAGAGGCAGAAGACCTTGACGAGGATGAAGAAGAGGCGGAGCGGCGGGAACAGGGTCTCCCGGCTCCACCGCCGCAGCGCGTCCTCCCGCCGCTCCACGGGCATCTCCGCGAACCTCCGCACGAACGGGAACCGGGGCGACAGGCACCGCGCGCCGCACAGCGCCAGCGTGCCCAGCCGCGTGCCCAGCAGCCACAGCACCGTCCGCACCAGCGCCAGAGCCTCCCGGAGGCACATTGCGGACATCAGCTGCGCAACCTCGTCCGGGACGGGCGGGTCGGCGGCGGAGGCGAGGAAGAAGTCCCGGACGGCCTTGCTGTCCGCCGCCGGGTGGTCGCCGTCGGGCGGCAGCGACGGGACCAGCGCGCCGCACGCGGCGGTGAGGGACAGCATCTGGGTGGCGGAGAAGCCGTGCGTGTAGGGCTCCTTCCTCGCGCCTCTCCCCGAAGAGAGGGTGGCC 5 0 5' arm Avena_barbata mirnest 100 100 -96.1 ......(((((.((((((((((((((..(((..(((((((((.........))))))..(((.(((...))))))((((....((((((((((.((((((....((((...((.(((((((((.....))))))))).)).))))..))))))))))))))))....))))(((((........)))))..))).)))))))))))))))))..))))). (-96.1)