mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCCGGGGGGATTCCTTCCTTA AGGGTGGACTCCTTCTGGATG ATAGAGGCGGAGGACAAGGGGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCCAACTGCTTCCCAACAAAGATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTATCCTAAATCTTAGCCTTCA ATTACAGGGGATATTCTAAGATCCTTAGGAAACCAAGATCAAGACTTTTGACAGAACTGCGAGTAGCAATTACGTCCGAGTTAAATCGCCAAAGAAAGAAACAGCATCACACATTCATAAATAGAATACGATATATGACCAACTTCCTGAAACATAAAAACGATGTAGTGTAATAACCAACCAACCACATCCAAGTTACCAACACGAAGTCACAAATTCACATGAAATGATGTGGGGCAAGTGCCCCTTGATTGTTCAAAAACAGGATACGATTTTAAACACCAAACTGAAGACACCCAACAAACAGACCACAAAGGCAAACACTTAGAAGCCACCATAGAGGCGGAGGACAAGGGGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCCAACTGCTTCCCAACAAAGATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTATCCTAAATCTTAGCCTTCACATTGTCTATCATATCCGAACTCTCCACCTCCAATGTGATGGTCTTCCCGGTCAGTGTCTTCACAAATATCTGCATTCCTCCTCTCAACCTCAACACCAAGTGCAGAGTCGACTCCTTCTGGATGTTATAATCCGCCAATGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGTGGAATACCCTCCTTGTCCTAAATCTTGGCCTCGTGC 3 0 3' arm Ocimum_basilicum mirnest 100 100 -48.7 ...(((((..((((..((((.(((((.(((.((((((((((........((((((.((((...((.........................))...)))).)))))))))))))))).))).))))).))))...)))).))))).. (-48.7)