mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GCTCACTCTCTTCTGTCAGCC CTGACAGAGAGAGAAGTGAGCAC CGAGGAGGATAGCTGACAGAGAGAGAAGTGAGCACGCAACAGCAGCTGCATCTAGGCCTGCATCCATCCACCCCCGCGTATTCAGAATTTCAGATACAGTCTGGCCGCTGCATGCTCACTCTCTTCTGTCAGCCACAGCACAC CGCTCAAAGTGTAGAGTAGATCTTAGTCATTATCTCGGGTCGAGTCGTTACAAGCACACCTGGGGAGGTGAGCAAAGCCAGGTGTTAATCAAACCGTCACGCGTCCTCCTCCCCCAAGGCTGAAGGCCGCCCCTGCTAATAATCCATCATCGGAAGCCACAAAGACAGCAACCACAAGTCCACAACTCGCCGAGAAAAGAAACCCGGCCGGCGCGAGGATCCATGGCGTGCATGCGCGCGGCGGCTGCCTGAAATTTAAGAGTACCTTGTTCCAAAGAGCAGGCAGGCCGGCGCCGTAGGAATCCGAGCAGGATTATTGCAGGTGGGGACACGGCAAGGCCGGCAGGCGCCTCAAGACGAACAGTGCCACGACGGCCACGGCGACCGATGCGAGAACGTCCGCACGACGACGCAGCGGTGCGCAGCAATGGATGGAAGTGGGAGGGGGGAGATGGACGCGGCGGAACAGTCCCGAGGAGGATAGCTGACAGAGAGAGAAGTGAGCACGCAACAGCAGCTGCATCTAGGCCTGCATCCATCCACCCCCGCGTATTCAGAATTTCAGATACAGTCTGGCCGCTGCATGCTCACTCTCTTCTGTCAGCCACAGCACACCACCATGTCCAGCGCCCCGCCCCATCCCACCGTCGACCACCGCTGAAAAGGGGGCCAAGCAGACGAGCAGAACTCGACACGAAGAGAGAGAGCACGAAAGGGGATC 1 2 3' arm Panicum_virgatum mirnest mir-156 0.000000000002 zma-MIR156f 0.00000000000003 -42.6 ...........(((((((((.(((((.(((((((.......(((((.((.(((.((..(((..............)))..)).)))....(((((...))))))).))))).))))))))))))))))))))).......... (-42.6)