mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCATCCTCATCATCATCCTGT GACGATGACGAGATGGGG CATCATCGCGCTCATCCTCATCATCATCCTGTCAGTGTGCCACGGCTTCAAGTGCGGCAAGTGAGGACGATGACGAGATGGGGAGTTTTTG CAAGGACCCTCCCCCCCCACCTCCGGCGAGCGCTCCACCGGCGGCAGCGGAAGAGCGGGGGTCTGATCCCAGGAGGCGAAGGAGCAGCGGAGCCGAGCGGAGGCCATGGGGCAGCAGCAGTTGATCTACGCGTTCGTGGCGCGGGGCACGGTGGTGCTGGCCGAGTACACCGAGTTCACCGGCAACTTCACCACCATCGCGGCCCAGTGCCTGCAGAAGCTCCCGGCCAGCAACAACAAGTTCACCTACAACTGCGACGGCCACACCTTCAACTACCTCGTCGAGGACGGATTCACGTATTGTGTAGTCGCTGTCGAATCAGTCGGCCGACAAATCCCCATTGCTTTCCTGGACAGAATTAAGGAAGACTTCACCAAAAAATATGGTGGTGGGAAAGCAGCTACTGCAGCAGCAAACAGCTTGAACAGGGAGTTTGGATCAAAACTTAAAGAGCACATGCAGTACTGTGTGGACCACCCTGAGGAGGTCAGCAAGCTTGCCAAGGTGAAAGCCCAAGTCTCAGAAGTTAAAGGAGTTATGATGGAGAATATCGAGAAGGTTCTGGACCGTGGGGAGAAGATTGAACTGCTTGTTGACAAGACTGAAAATCTGCGTTCTCAGGCACAAGATTTCAGGCAGCAGGGCACCAAGGTGCGGCGGAAGATGTGGCTGCAGAACATGAAGATCAAGCTGATCGTCCTGGGCATCATCATCGCGCTCATCCTCATCATCATCCTGTCAGTGTGCCACGGCTTCAAGTGCGGCAAGTGAGGACGATGACGAGATGGGGAGTTTTTGCTCTGTGCCTCTGTTAGTGGTTGAGTCTGATTATTCTTGGTGATCACAGAGCTATCCTGATGCCTGTTCTGTGGTTGTTGATTGCTGATGGTTGGTCGGGGGAAGTGACTGGGTGATGGAGGTGTTCGAGTGTCGTGTAATTTTGGATGCTACTATTGTGCATGTATAGCTTGTATTGCTACCCTGGTCGGTCCCGCTATATCAGTAGAGGTTGTTCTACGTTTGCCCTCCA 4 1 5' arm Panicum_virgatum mirnest 100 100 -24.4 .......((.((((((.((.(((((.(((..(((...((((...(((...)))..))))..)))))).))))).))))))))..))..... (-24.4)