mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGAGAAGCAGGGCACGTGCA CATGTGCCCCTCTTCCCCATC GTGTGTAGAGCAAGATGGAGAAGCAGGGCACGTGCATTACTAACTCACCAACCATAAAAAACACTGACACATAAATTCAATTGATTGAGTTAGTTCTTCATGTGCCCCTCTTCCCCATCATGAACCACTCC GGGATATCGTCGACCCACGCGTCCGATTTCACCATCTTACTCTCTCTATCTCTCTTCAACACCTCCCTTCTCTTCTACATACAAAGAAGAGCAAGTGTGTGTATATATATATATAGATACACACAACACTATATCTATACATACACAAAACACAACTGACATAAAGCTTGTTGAGTTCAGAAACTAAACTGGTGTGTGTAGAGCAAGATGGAGAAGCAGGGCACGTGCATTACTAACTCACCAACCATAAAAAACACTGACACATAAATTCAATTGATTGAGTTAGTTCTTCATGTGCCCCTCTTCCCCATCATGAACCACTCCACCATTGAAGAACAATTCAAAAACAATCAAGCAATTGCAGGTGAGTTGATATATTTAGAAATTTAAAAAAATAA 5 0 5' arm Paullinia_cupana_var._sorbilis mirnest MIR164 5e-16 ctr-MIR164 3e-20 -37.1 (((.((....((.(((((.((((..(((((((((....(((((((((.(((.............................)))..)))))))))....)))))))))..)))).))))).)).)))))... (-37.1)