mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CGCACGTGCCCTGCTTCTCCA GAGAAAAAGAGCACATGCATC ATTCTGTAGAAATAGGTGGGTATTCCATGATGGAGAAAAAGAGCACATGCATCGGCAGTAGCCCATCACAGACTGCCTCGCACGTGCCCTGCTTCTCCAGCATGTATAGCCCTCCCTATGACACTCAG TTTTTTTTTTTTTTTTTTGCAATACCAACAATGTCACGTCTGCTTTTACAACGCTTTTGACATTTATAAATAAATACGTAAAACACTGTAACGCGAAGCTGGATTTGACTGTGGATTCGACATAATATCTCAAACAAAGCTATAATACTCGGTACAACTTCCAGAGAACGGTGCCACTACTCAGAAACCTTATTAAAGCTGTCAAATCTCAATTGCCCACAGAGCCCAGTTGCCATGACATCATCGTGCAATTGGCAGACTTTATGAAATCCGATTGGCGCAGCAAGCTATTCATCTCACATTGTAGGCATTTGGGTTCTCATCAGCCTGTCGGTCCATAAACTGTGGATCATAAACAAATCTTAGTAACCAGCAGTTATTCTGTAGAAATAGGTGGGTATTCCATGATGGAGAAAAAGAGCACATGCATCGGCAGTAGCCCATCACAGACTGCCTCGCACGTGCCCTGCTTCTCCAGCATGTATAGCCCTCCCTATGACACTCAGAGCTTCATACTTCCTGTAACATCCACCAGCCAAAAACTGGTCTAAATTATCATAATATCCACAG 5 0 3' arm Picea_glauca mirnest MIR164 0.000007 sbi-MIR164b 0.000006 -44.4 ....(((....(((((.((((....((((.(((((((..((.((((.(((...((((((............))))))..))).)))).))..))))))).))))....))))..))))).)))..... (-44.4)