mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTCCACGGCTTTCTTGAACTT GATCAAGAAAGCCGTGGGAAA CCGTCATAGTTTTCCACGGCTTTCTTGAACTTACTTCACGATCAGGTCTGTTGGCGGCCGATCGCATCGATAACAGATCCGGGTGACAAGATCAAGAAAGCCGTGGGAAATTATAGAG ATGGACAAGCGATAATTTCGCGATTATATGGAGTCAGATATGGTGATAATAATGGCGATAAGACGGCAGGAAGGAGCATTAAGGACCGCAGAAGTTGTAGATATACAATCGATGGCTCTGCTCTCCATAAGGAAAAAGATAGAATTCTTCAGTCCTACCCCTACTGCTGCAATGATTTAAATCCAACGCCGAGGATGTCTTTTCGGGCGCAGATGAAGAAGGGAAAGCTTTCGGCTATGTTGCGAGCGTTGGATACGGGGCCATTGCAGTGACCAAGTTATTATCACTATTTAGTACCGGAGAATGCCGTCATAGTTTTCCACGGCTTTCTTGAACTTACTTCACGATCAGGTCTGTTGGCGGCCGATCGCATCGATAACAGATCCGGGTGACAAGATCAAGAAAGCCGTGGGAAATTATAGAGGGATTCAATAATATTGCTTCTGCTGTGACTGGACTTTGTAGTTATCTATCCAGATCCATAACATAACCCTAGTCTAGGTAAACGAATGAGGTGTCGGCTTCTCTGACTGGTAAGTAATCTGGGGGTCTTTCATTATTGGCTGCTGTGATTGATGTGTTGTTGATATCGAAAGTTTTGAATGAAAGATGATTTCTTCGATCTCGAAAAAA 1 0 5' arm Picea_glauca mirnest MIR396 0.0001 pab-MIR396b 7e-61 -49.5 ...(((((((((((((((((((((((((.(((...((((..((.(((((((((...((.....)).....))))))))).)))))).))).))))))))))))))))))))))).)). (-49.5)