mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTCAAGAAAGCCGTGGAAAAG TTCCCACGGCTTGCTTGAGCT CCTCTATATTTTCCCACGGCTTGCTTGAGCTTCTTATCCGGATCTGTTAGCGGTCGGGAAGTTCAAGAAAGCCGTGGAAAAGTATGACA TTTTTTTTTTTTTTTTTTGGTTACTTACAGATATCTCGTCCGAGAGCCTGGAATAAGCTTATATTAAGGATCTGGAAACGGAACCACCAATTCGGATCACAGCAGAAGCAATAAAATAGAATCCCTCTATATTTTCCCACGGCTTGCTTGAGCTTCTTATCCGGATCTGTTAGCGGTCGGGAAGTTCAAGAAAGCCGTGGAAAAGTATGACAGCATTCTCCGGCTTAGAGTACTGATAAATAAATAATCTTCCACAATTGGTGATCGCTCTAATGGACCAAAGGTTCCCGAGTTCTTCGAATCCGACCGAAAAGGCGTCAGTCGGCGGGACTGAAGAACTCTCTATCTTTCCTTATGCAGAGGGAGGGCTATCCATCGTATACCTTTAACCTCTGCGGTCCTTATGCTCTCTCCTTCTGTGTTATCGCCATTATTATCACTACAGATGATTCATATAACCACGAAATTTTCGCAAGCAATTACCTACCTGGATACCCGTCCGATCCGACTCTTTCTGCCAGGAAAACTGCACGCGATCCACGGATTTATGGTGAACTTGGACGGGGTTCTGAGGAGGTAACCAGACC 2 0 3' arm Picea_glauca mirnest MIR396 0.0000003 pab-MIR396c 0.00000000002 -39.3 ....((((((((.(((((((((.((((((((((((..(((..........)))..)))))))))))).))))))))).))))))))... (-39.3)