mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CACCAAAGGCCTCTGCCCTTC AGGGCAGAGCTTTTGGTTTT ACTGGAAGGGACACCAAAGGCCTCTGCCCTTCCATCCCTTGGATAGATAGAGAGGGAGGGCAGAGCTTTTGGTTTTATCATGTT CGCAGTAGAGTTTAACCACCAAGTTCCGGGATGGATTGGCGTGGTTCCTCTACGCCTAGGACACCAGAATATCGAACCATGAACGAAGAAAGGTATGAGAGAAATATGGGCTAGTGATTGTGAAGCCCAAATTCTTGACTGGAAGGGACACCAAAGGCCTCTGCCCTTCCATCCCTTGGATAGATAGAGAGGGAGGGCAGAGCTTTTGGTTTTATCATGTTGTCAAACAGTTGAACAATGAAAATAGATGGCGAGTGCCTGATCGAAATTGATCGGGTCATT 1 1 5' arm Persea_americana mirnest 100 100 -34.4 .((....))...(((((((((.(((((((((((.((..((.....))..))..))))))))))))))))))))........... (-34.4)