mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ACTCCCTCCGTCTCAAAATAG ATTTTGAGACGGAGGAAGTAC GACTAAATACTACTCCCTCCGTCTCAAAATAGATGTCACAGATTTATCAAAATTTAAATGAATCTAGACATTATTTAGGATATAGATACATCCAAATTTTGTGAAATTCCCGACACCTATTTTGAGACGGAGGAAGTACTAGAAACC ATCCCCACTCCATGTCTGGAAAATTTCCATGACCATAGAGAGAGAGCGAGCGAGAGAACTGTTCAGGCGGCGACGGCCCCGCGGCTCCTTCCCCTCCGCCACCGGTCCTCTGCACCGCCATGAAAGAGTTCCTCTCTGGGTGAAAGCCTATTTTGAGAAGGAGCGTGGTTGGAAGAACAAGGATTTACCAAAGAAAATTAAGGGGTTGGCCTTGTCTCAGTGGGCTTACAAGGAATTCCTTCAGATGGAAGATGTGTGTTAGCATGCTGTCAATATTAGCCAGAATGGAGAGGCTGATGTTCGGACTTATATATGGGGGAAATACTCAGTTTTCTTCTCAAAAGGCATTTAAAGTTTTAATTGGTTTTCAGCCAGTGCCACCTCACTTCAAATGGATCGCTAGAGCTGTCAGCAGAAAGTGTTATTTTGGTTACTCTTGAATGAGAGACTAAATACTACTCCCTCCGTCTCAAAATAGATGTCACAGATTTATCAAAATTTAAATGAATCTAGACATTATTTAGGATATAGATACATCCAAATTTTGTGAAATTCCCGACACCTATTTTGAGACGGAGGAAGTACTAGAAACCTGCTGGCTAGGAAAAATTTCCAAGTTCAATCCTACAACTGTGGAACATTACAATGTGCA 1 0 5' arm Avena_sativa mirnest MIR1122 0.0000005 100 -49.3 .......((.((((.(((((((((((((((((.((((...(((((..((((((((..(((.(((((....((....))....))))).)))..))))))))..)))))...)))).))))))))))))))))).)))).))...... (-49.3)