mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCATCGTCACCATCATCATCA GTGGTCATGGCTGCCATGTGA ATTGCCCCCATGGTGGTCATGGCTGCCATGTGATCATCGTCACCATCATCATCATATCCTATT ACTAAAAGAAATTTATCACAGATTTGTTACTTGGAAAAAGTAAATATTTTTATCTTTAAAAATTCAAAAACAAACTATTACAATGTAGCAAGATTATAAATAAATAAATAAAGAGCATTTCAATGATGGCAGCTCATCATTGACTCCTTTGTAGTTTAGTTTAATTAAATACCCTTTGTTTTCATGGAAATCCATGTATGTGACTCAGGTAGGAGTATTGTTTAGATTACCAAATTCCAAGAAACAATCTCCCCTCCTCCCCTCTCTTCTCTTCTCTGTAAGAAGTTCTTTTCAGAATCTTCATTTCTTCTGACTACTCTCAGCTATTATGAATTGCCCCCATGTTCTCTGATTTTCACTTTTTCCCATTTTTTAATTTACTAATCTATATGCTATGGGCATATTCCCTTTCATTTTGTACACACACACACAGAGAAAGAGGATTCTGTGTGTTGCGATTGCCCCCATGGTGGTCATGGCTGCCATGTGATCATCGTCACCATCATCATCATATCCTATTAGATTCCTTCTCTTCCATTAATTGAATTTTGTCTTTATATTTNTCATTAATTAATATTGTTTCACTGATAGTTNGTATTATCTTATAGTATTAACTTCTTCTATAAACTTGTTTTCAGGGAGCAGCACCAGACACTACTGGAGAACCACTTGGTATCCGTCCCCCTCAC 5 0 3' arm Barnadesia_spinosa mirnest mir-598 0.00005 ath-MIR414 0.0007 -12.5 .........((((((((.((((..((.(((....))).))..)))).))))))))........ (-12.5)