mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGATCATCATCATCATCTTCA ATGACGATGATGATGATTACA CTGCATCAGTATGATCATCATCATCATCTTCATCTACACAGCCTTAGAGTGGCTGGACGGGTGTCACCTCTCCCTCTGATGATGATGACGATGATGATGATTACACTTGGTTC AGACGATATCGTCTTACACACTTGATAGTTCGACTGCATCAGTATGATCATCATCATCATCTTCATCTACACAGCCTTAGAGTGGCTGGACGGGTGTCACCTCTCCCTCTGATGATGATGACGATGATGATGATTACACTTGGTTCTGCTTCAGAGATTAAAAGGGTGCATCAATCTACGTTAGTATCTGTTTCAGAGATTGGGGGCCACAGGTACTCTCCCTGACCACAATGAATGTCTTATTTCTCTTGGATTGGGAGTATGCATCAACCTCAGTCAATATGATCTCCTCCACTTTGGGTCACCTGTCCCTCTGTCGCCATTAGAAAGTAGGACACATGTCATCTATTGGCATGTTCATTTTTTGGACCGTTCTCACCACTTCACTGCCATGTGATTGTTGCCATCACCAGGAACATGTTTAGCATGGCTGACGAACAAAACATTTCCCTTGGCCTCCCCAACCAACAGCCCCTACACAGGGTGAGTCATGGGCCATGTGGTGTTCATGTGCACCATTGGCCCGCAATGTCGAAGGCGTGGCGGCCAAGGCAGACGGCGGGGTTCTCCCGGCAGATCGCAAAGGCGCGGAACTGCGTGGTGCCGGGGTTCTTGCTCCAGCAGCCCTTGACCCAGCCATCTC 2 0 5' arm Botryococcus_braunii mirnest mir-598 0.00002 100 -39.4 ..((...(((.((((((((((((((.((.(((((..((.((((.......))))(((.((((...)))).)))...))..))))).)).)))))))))))))).)))..)).. (-39.4)