mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GGAGAAAGACTGGAGAGGAGT ATTTCATCATCTTTCTCACA AAACATGCCTCGGAGAAAGACTGGAGAGGAGTTTAACTTCACTTATGTAGAATGCTTGTTGTACACATTTCATCATCTTTCTCACAAGGTTCCA GGCACGAGTGACAGCCTTATTCAAGCACATTGGGAGTGTTGATGAACCAAGCACAGATGAGTTTATTCGTGAGAAGGTTTTAACCTTTATTCGAGAGAAGGTGTTTCCAATTAAATCTGAACTTTTGAAGCCTCAGGAGGAAATGGAAAGGCATATTACTGACTTGATAAAAAAGAGTTTAGAAGATGTAACTGGGGCAGAATTTAGAATGTTTATGGACTTCTTAAAAAGTTTGAGCATATTTGGGGAGAAAGCTCCTCCTGAACGCATGAAAGAACTAATTGGTATTATTGAAGGACAAGCTGATTTAGATGCCCAATTCAATGTTTCAGATGCAGATCATATTGACAGGTTGATATCTTGCTTGTTCATGGCTCTGCCATTTGTTGTGAGGGGTGCGTCAAGCAGCAAATTCCTCAACTATTTGAACAAACACATCCTTCCTGTTTCAGATAAGCTTCCTGACGAACGAAGGCTAGATTTGCTCAAAGCCCTTGCAGAAGTTTCACCTTACACAACTCCACAAGATTCACGTCAGATTCTTCCTTCTGTTGTTCAGCTGTTAAAGAAAAACATGCCTCGGAGAAAGACTGGAGAGGAGTTTAACTTCACTTATGTAGAATGCTTGTTGTACACATTTCATCATCTTTCTCACAAGGTTCCAAATGCTACTAACAGTCTATG 3 1 5' arm Prunus_armeniaca mirnest 100 100 -20.8 ......((((..((((((((.(((.((((.((.((((..((.((.....)).))...))))...)).)))).)))))))))))...)))).... (-20.8)