mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGACAGAAGAGAGAGAGCACA TAGCTCTCTGGTTTAGTGTCCAT TGGTGTGGGTTTGACAGAAGAGAGAGAGCACAGTTTGAGTCGCTGCCAATCCCCTTGTAGCTCTCTGGTTTAGTGTCCATAACCTCTG TTTTTTTTTTTTTTTTTTTGGAAACAACCAACAAGAAGCATAAATAAACAAAAGCCAATGTATGGAAACAATTTTTTTGGTTCATGAGTAAAGCAAATAACAGAAAAAAAAAAGAGAAATATAACAAGAATATGATTGTCTGATGCAAAGAGACTCAGAAAGACCAGTTGTGATGGTGTGAAGAAGAGTCATAAGCCCTTGAGTTCTCACCTTCCATGTACTGCCTCCTATTCTGATGTTGATGGTCAGATAACTCGAACTCACCCATTGTCGTTCCACCGCCCATCTCTGTCTCGGTGAATCGCCCCAAATTCAAAACAGGAGACATATCATTCTGACAGTTATTGTCATCGTCCTTAAACACCCAAGGCGGGTTCAGATACTGATGCTGGCTAGGTGCAGGTGGTGGCTGAACCATTGTAACCGTCATCGGACCAAAACCTGAAGAAGTTCTCCATGTGTTGTTGTCGTTGGTGTTGTCATGTGGCTGGTGTGGGTTTGACAGAAGAGAGAGAGCACAGTTTGAGTCGCTGCCAATCCCCTTGTAGCTCTCTGGTTTAGTGTCCATAACCTCTGGAGATGAGAAGCTTATCCCTCCTCCTCCTCCTCCACTGACTGATCCTTGACTAAACACGTTCATCGGATTGATCTGCCACGACGGTCGTCTCATCACTCTTGCATCCAACGTTCTTGTATTTGTCCAACCCATTTCTTGGGAACCAAGAAAGCTCCCATTCATTGTAGTTTCAGCATTTCCGTAAAGCGAAGGTGCTATCCTCCCGTAACGAGAAGACAACACAGAGAGAGACGCAGGCTGTGGCTTCCTCCGTCTCTCATTATGACCAGCGAGTCTCCTACGGCAACTCCTTTTCTCTAGGTCAAATTCCGGAAGCTGATGAAACCTGCTGCACTGTTGACAGAACCTTTGTTCGATACCAGCGACAATGACTTTGGGTGTTTTAGAGTGCACTCCACACACTCTGTGCCTAGAGTAATAACCCTTTGCATTGGC 4 2 5' arm Raphanus_sativus mirnest mir-156 0.0003 far-MIR529 0.000000004 -22.3 ......(((((.((((.(((..(((((((((((.(((.((....))))).....)))).)))))))..)))..))))...)))))... (-22.3)