mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TACATTACTGTGATAAATAAT TGTCATTGTCAGGGTCATGTAAA GTTGTCATTGTCAGGGTCATGTAAAAATTACATTACTGTGATAAATAATAAATGATTT GTTGTCATTGTCAGGGTCATGTAAAAATTACATTACTGTGATAAATAATAAATGATTTTGTTTTATTATTGTAATGATAATAGTTTGAATTGTTGTAATGCATTTTCCATGTGTGTTTTACACAAGCATAACATTTATCTGTGGTTCAAATACTGTATCCCAGCAACCGGCAAGTGAATGAGAGGTTACCATAGCAACAAAACATCATGAAAAGAAAAACAAGCCCGATCGATTCAACTGGCTCTGGTGTAAGTACCATACTATACAAAATCAGTTCTTTAACTGAGGAAATCTCACCAAATATTGACTCTGGCTTGTGTACAAAGAAAATTATAATTCCCGGTAATCACGTCGAGCAAGCAATGGCTTACAAAAACAGTATTTGGTACAAATCGTTACTCAATGCTGAGAAAACATGTTTGAAGGAAGACCAAATAAAAAAGATTCATTATAAGTTTGAAGATGGTAATGAAATGGTTGAAGAATATAATGCGGACACCCGGGTGTTGTTAAGGCGCGCCTGGAAAGTGAAAGGGAAAATCGGAGGTGAAGGCAAATGGTTAGTGGAAATTGGAGATCCTATACCTGATGCTGTTACAAATACAGATGCTCTGGACATAAAGGAGAGCAAAGATCAGCCTGTTTTATTAAAAAGAAATACAAAAATCAATATAGAATGGAGAATACGCAACCTCCCAT 2 2 3' arm Bicyclus_anynana mirnest 100 100 -13.7 (((((..((((((.(((.((((((...)))))).))).)))))))))))......... (-13.7)