mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CACGAGACGAATCTTTTGAGC AAAAGATTTAACTAATGAC AGGTAAAAGATTTAACTAATGACACAGTTTGGTTGTAAATCACGAGACGAATCTTTTGAGCCCAATTAGT AGGTAAAAGATTTAACTAATGACACAGTTTGGTTGTAAATCACGAGACGAATCTTTTGAGCCCAATTAGTCTATGATTGAACATTATTTGCCAAATACAAACGAAAGCGCTACAATGGCAAAATACTGATAAATATTTTTGCATCTAAACACCCCCTTATTCGCTTCTTCCAATGCTTTGCAACATGCGGATTAGGGAGGGTACCTTTCATCAAAATATCCCTGCTGCAACTGAAAGGTATTGAACGTTGTTCTTGTACAGTACATTACAACCGGGCTTTGGCTAGCGCGGCGGGCTTGAAGCTCGTGATCCCGGTGATCTCTCTGGCGGTCACCAGGCTGTTGATGTCGTATGTGCCTTCGTACGAGTAAATTGGCTCCAGGTCGCAGAACGCCTTTGCCACAAGGAAATCGGCCAAAATTCCGTTCCCACCCAGCAGCTCTCGGCCAAGGGAAACCACCTCGCGGGCCATCCTGGAGTTCCAAGCCTTCCCTAGGCTAGCGTGGCCTGGCGTCATTTTCCCCGACTCGTAAAGCTTGCAGAGGCGCCAGCCAACAAGGAGCATCGATTGGACGTTACCGAGCATCCGGACAAGTTT 4 2 3' arm Saccharum_officinarum mirnest 100 osa-MIR2124a 0.00000001 -11.5 .((((((((((((..((..(((.((((.....))))...)))..))..)))))))))..)))........ (-11.5)