mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGACGGAGAACTGATAAGGG CTTATCACTTCTTCCGCCGAG CTCCTGGTTCTGCACGCTCCCTTATCACTTCTTCCGCCGAGCTCGTGTCTCTGAGTCAGCTGGACGGAGAACTGATAAGGGCCCGTGCCGAACACCAATCC 1 2 3' arm Branchiostoma_floridae mirbase mir-184 9e-42 aae-mir-184 0.00000008 -43.3 ......((((.(((((..(((((((((.((((.((((((.(((((......)))))....))).))))))).)))))))))..))))).))))........ (-43.30)