mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAACACTGTCTGGTAAAGATGC ATCTTGGTCATATAGTGTTGTAGA TGGTGTATCTTGGTCATATAGTGTTGTAGATTCATGATCTAACACTGTCTGGTAAAGATGCATTCGACGTGTCTC 3 2 3' arm Ciona_intestinalis mirbase mir-8 0.00002 csa-mir-141 0.0000009 -23.8 .((((((((((..(((.(((((((..((((((...))))))))))))).)))..))))))))))........... (-23.80)