mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGAACTTATACGAACAGGC CAATTCGTACAAGTTCAA TGGAACTTATACGAACAGGCTGTGCTGTTCAGCCAATTCGTACAAGTTCAA 5 0 5' arm Ciona_intestinalis mirbase 100 cin-mir-4001a-2 4e-23 -22.4 ..((((((.((((((..(((((.......)))))..)))))).)))))).. (-22.40)