mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAAATGGATCTTGACAAAAC TTTGTTTTAAGGCTTCATTTTCT TTTGTTTTAAGGCTTCATTTTCTACAAATGTCAGAAAATGGATCTTGACAAAAC 2 3 3' arm Ciona_intestinalis mirbase 100 cin-mir-4072 7e-25 -15.1 ((((((..((((.((((((((((((....)).)))))))))))))))))))).. (-15.10)