mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAGTTGGAAATTGATTGACT TTAATTGACTCCAACTA AAGTTGGAAATTGATTGACTGGGTTTCGAAATATACCAGTTAATTGACTCCAACTA 4 1 5' arm Ciona_intestinalis mirbase 100 cin-mir-4077c 7e-19 -22.22 .(((((((..(..(((((((((.............)))))))))..).))))))). (-22.22)