mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TATTGCACTTGTCCCGGTCTT GGTCGGTTTAGGCGCATTATC CCCAGCCTGACAAAGACCTACTGAATACAGTGCTGCGGTCGGTTTAGGCGCATTATCTCTGTTGATATTGCACTTGTCCCGGTCTTAGTAAAGTATGACT 7 0 3' arm Ciona_savignyi mirbase 100 cin-mir-92a 0.0000003 -29.6 ........................((((..(((((.(..(((..((((.(((.((((......)))).))).))))..)))..).)))))..)))).... (-29.60)