mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAACACTGTCTGGTAAAGATGC ATCTTCATCACGCGGTGTTCTAGA TTGGTCGTCGGTCGCATCTTCATCACGCGGTGTTCTAGAACTCATTCTAACACTGTCTGGTAAAGATGCGATCGGCGGCTACTT 2 2 3' arm Ciona_savignyi mirbase mir-8 0.000004 mdo-mir-141 0.0000002 -47.3 .(((((((((((((((((((.((((.(((((((..(((((....)))))))))))).)))).)))))))))))))))))))... (-47.30)