mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGCAAGATGCTGGCATAGCC CTGTGACTGCATAGGGCCACC ACTGGACGAGTGGCAAGATGCTGGCATAGCCGCTCACTCTCAGAGGCGGCTGTGACTGCATAGGGCCACCCGTCTTGT 6 0 5' arm Petromyzon_marinus mirbase 100 sme-mir-31b-3 0.0009 -41.7 ((.(((((.(((((...((((...(((((((((((.......)).)))))))))...))))...))))).))))).)) (-41.70)