mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAGTGCAATGTGAAAAGGGCAT CTCCTTTTTATATTGTGCTACT ATGTGGTGGAAAACTCCTTTTTATATTGTGCTACTGTGTCCTCTGCGAAGTAGTGCAATGTGAAAAGGGCATTGGGGAGTCGCGCCTTTC 6 0 3' arm Petromyzon_marinus mirbase 100 xtr-mir-130a 0.0003 -33.1 ....((((((...(((((((((((((((..(((((.(((.....))).)))))..)))))))))))))......))...)).)))).... (-33.10)