mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTTGGTGATGATTTTGATGACG CGGCATGATCGATTGGACCGGTGT ACCCGGCACTCGCGGCATGATCGATTGGACCGGTGTTGCGCCCGTGGTTTTGGTGATGATTTTGATGACGAGGCTGAAG 3 4 3' arm Petromyzon_marinus mirbase SNORD15 0.000001 100 -23.3 ...((((.((((((.((.((((.(((..(((((..(..(....)..)..)))))))))))).)).)).))))))))... (-23.30)