mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ACGTTGGCTCTGGTGGTG CCACCTCCCCTGCAAACGTCC AAGAAGAGCCTCCACCACCTCCCCTGCAAACGTCCAGTGACGCAGAGGTAATGGACGTTGGCTCTGGTGGTGATGGACAGTCACA 4 3 3' arm Xenopus_laevis mirbase mir-1306 6e-30 gga-mir-1306 1e-33 -33.9 ..((....((..(((((((......((.((((((((...((......))..)))))))).))...)))))))..))....))... (-33.90)