mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTTTTTGCGGTCTGGGCTTGC AAGCCCTTATCCCAAAAAGAA TCTCAAAGCTTTTTGCGGTCTGGGCTTGCTGTTCTCAATCAAAGTATCCAGGAAGCCCTTATCCCAAAAAGAATTTGCGAGG 4 2 5' arm Xenopus_tropicalis mirbase mir-129 0.000000001 rno-mir-129-1 0.00000000006 -25.7 ((.((((.(((((((.((...((((((.(((..((.......))....))).))))))....)))))))))..)))).)).. (-25.70)