mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTTCTTCCTCTTCCTCTTCTC GAAGAGGGAAAAAAGTAGTG GGAGAAGAGGGAAAAAAGTAGTGGAACATTTATTTATTCTCTCGTCTTCTTCCTCTTCCTCTTCTCTCCATAATT GGAGAAGAGGGAAAAAAGTAGTGGAACATTTATTTATTCTCTCGTCTTCTTCCTCTTCCTCTTCTCTCCATAATTTCAATCTCCTAGCTTGCCTCATTTGCTCCTCCGGCCGATAAACCCCGACGTTCTTGCCTTCGCCGTCGCCGATCCGCCTCAGGAAACCCTTTGCTCCTCCGGCCGATTGACGCCGCTCCAGCCACAGCCCCTTTGCTTCTCGTCCGAGGCGCTTCAGAAACTGCAACCATGAGTACCATGAAGTTTTGCCGTGAATGCAACAACATTTTGTACCCAAAAGAGGACAAGGAACAAAAGGTCCTCCTCTATGCTTGTCGCAACTGTGATCATCAGGAGGTTGCTGAGAACAACTGTGTATATAGAAATGAGATACATCACTCGGTTGGTGAGCGCACCCAAATCTTACAGGATGTAGCTGCTGATCCGACCCTTCCTCGTACTAAAACTGTTAGATGCACTCTATGCAACCACGGAGAAGCTGTATTCTTCCAGGCGGCCGCGAGGGGCGAGGAGGGTATGACCCTGTTCTTCGTTTGCTGCAACCCTAACTGTGGTTATAGATGGAGAGATTGATGTAACCAGAGGAATGAGCTCCTGGAGATTTGCTTGCTGACTTATAGAAATGTTTTGGGTGCTCCTTGTTATAAACAGGTTCCATCAGTAGCTTAAAGGTTTGCTTACTGAGATCTTACAATGCCTGCTTTCAGCTTGTTGTTTCACTTTTTACTTGTTCAACAAAGCTGATGTTTGCTGTGAACATGGTTGGGTGGAGTTTGATCAAAGTATGATTCACTCTTCAAAAAAAAAAAAAAAA 4 1 3' arm Saruma_henryi mirnest 100 100 -17.5 ((((((((((((...(((.((.(((..............)))...)).)))....))))))))))))........ (-17.5)