mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AACATTCAACGCTGTCGGTGAGT CATCGACCGTTGACTGTACC GCCATCTTTGGATAGCTTCAGTGAACATTCAACGCTGTCGGTGAGTTTGAGAACTAAGAAAAACCATCGACCGTTGACTGTACCTTGAGGT 2 3 5' arm Gallus_gallus mirbase mir-181 7e-36 tgu-mir-181a-2 4e-31 -30.1 .(((....)))...(((((((.(.(((.((((((..(((((((.((((............))))))))))))))))).))).).))))))) (-30.10)