mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CAGCCTCTGCTGATCGTCTTTT AGGACACTCTGACAGAGGCACCGCT GCAGTGTGCAGAGAGGACACTCTGACAGAGGCACCGCTGCCCAGCAGCCTCTGCTGATCGTCTTTTCCTTCCAATCTGC 4 3 3' arm Gallus_gallus mirbase 100 100 -29.9 ((((..((..((((((((..((.(.(((((((...(((....))).)))))))).))..))))))))....))..)))) (-29.90)