mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CAGGCAGCGAAAGCAAGTCTG GGCTTGTTTTCCGTTGCCTGCG CCACCCTGCTGTGTCCCGGGCTTGTTTTCCGTTGCCTGCGGTGTGTTGCAGTGACTCAGGCAGCGAAAGCAAGTCTGGGAGGCTGTGG 0 1 3' arm Gallus_gallus mirbase 100 gga-mir-1788 7e-45 -48.1 .....(..(.((.((((((((((((((((.((((((((((.((.....)).))...)))))))))))))))))))))))).)).)..) (-48.10)