mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCTTTGGTTATCTAGCTGTATGA ATAAAGCTAGATAACCGAAAGTA CGAGTTGTTATCTTTGGTTATCTAGCTGTATGAGTGTTTTGGTCTTCATAAAGCTAGATAACCGAAAGTAAAA 3 0 5' arm Taeniopygia_guttata mirbase mir-9 7e-20 gga-mir-9-2 5e-36 -28.1 .......(((..(((((((((((((((.((((((..(....)..)))))).)))))))))))))))..))).. (-28.10)